PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992979.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 221aa MW: 23822.3 Da PI: 7.5226

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg++F++ L H ++H XP_022992979.1 71 YECKTCGRTFPSFRALGGHRSSH 93 99**********99999999888 PP
2	zf-C2H2	14	0.00015	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F++ L H+r+H XP_022992979.1 143 HECSVCGSDFTSVQALSGHMRRH 165 78********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MNPNGFSEPN SELLGRCNLS SSSSSIGGGG GGGSGGEDEQ EDVAKCLILL SHQGLPEGQN 60 GAGKATECCA YECKTCGRTF PSFRALGGHR SSHKNPAMAA GDQKSISGTS PAYKHQQQRL 120 NNTISSPFDQ LRMNRTGYYH KTHECSVCGS DFTSVQALSG HMRRHHRGCG RDSGEIVHRR 180 RNLLCLELDL NLPAAEEDKR DQSGVVSMAA MDLVSSHYRE H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-20	C2H2 family protein