PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993155.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ERF

Protein Properties

Length: 419aa MW: 47167.2 Da PI: 4.6922

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	61.9	1.5e-19	69	120	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa a+++a++ ++ge XP_022993155.1 69 CKYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAALAYDEAARTMYGE 120 79***999.******8...3.35**********************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MTPETIERKR KSRSRRDRST VAETLAKWKA YNECADSCND EDKPIRKAPA KGSKKGCMKG 60 KGGPLNSQCK YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTAIEAALAY DEAARTMYGE 120 TARLNLPNIK NRGQLRGILL EDYLGLRNSD SSTATSTCSG STITTSNQSE VCVPEEFALW 180 PPSDIKIEDG EGESRTWDHS GHAPTTMCLE KPVKHEDVEA KYLEHHNNQT VLPDTELPSW 240 DHLQNFQMDV MFEPRIGDQA DDTAKPMSME KKQVKNEDND AKHLDQRNDQ TVSSGTEIPG 300 VDDLQNFQMD EMFDVDELLG LINSDCLYDP SILQGNVDGF NSTAPSQVSD HGSEKASSLS 360 YQFQNPDAKL LGSLQHMEQS PANVDCRFDF LKQGREEDVN AAADEYIRYL NYEMDDMGF

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MTPETIERKR KSRSRRDRST VAETLAKWKA YNECADSCND EDKPIRKAPA KGSKKGCMKG  60
KGGPLNSQCK YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTAIEAALAY DEAARTMYGE  120
TARLNLPNIK NRGQLRGILL EDYLGLRNSD SSTATSTCSG STITTSNQSE VCVPEEFALW  180
PPSDIKIEDG EGESRTWDHS GHAPTTMCLE KPVKHEDVEA KYLEHHNNQT VLPDTELPSW  240
DHLQNFQMDV MFEPRIGDQA DDTAKPMSME KKQVKNEDND AKHLDQRNDQ TVSSGTEIPG  300
VDDLQNFQMD EMFDVDELLG LINSDCLYDP SILQGNVDGF NSTAPSQVSD HGSEKASSLS  360
YQFQNPDAKL LGSLQHMEQS PANVDCRFDF LKQGREEDVN AAADEYIRYL NYEMDDMGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	10	17	RKSRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.1	4e-31	ERF family protein