PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993158.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 243aa MW: 27096.9 Da PI: 10.0786

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	64	110	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L A++ +k+L XP_022993158.1 64 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSAIDQVKDL 110 79***********************8.....7***********99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEDNWDSSTK PEGLDSSREP SLRLPWMINP QLSSSTELRI DGFPSFSTPV EGIIGEDRAA 60 SASKSHSQAE KRRRDRINAQ LATLRKLIPK SDKMDKAALL GSAIDQVKDL KRKAMEASKN 120 MTVPTDMDEV TIDSTMVEDH SRNNIEIKVS VSCDDRPELF TELIQVIKGL RLTTIRADMA 180 SVGGRIKSIL VLGNKDGEKS VCLNTVQQSL KLVLSRLSSS SSASTYRIRS KRQRFFLPSH 240 YSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	1e-47	bHLH family protein