PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993293.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 230aa    MW: 25693.3 Da    PI: 10.6243
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.5e-1971125256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q + Le+ F+ n+ ++ +++e LA+ l+L+ rqV vWFqNrRa+ k
  XP_022993293.1  71 RKKLSLSKHQSRLLEDIFRHNHSLNPKQKEALAMALQLKPRQVEVWFQNRRARSK 125
                     788899***********************************************98 PP
2HD-ZIP_I/II109.72.1e-3571160191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+ lsk+q++lLE+ F++++ L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E++y++L+r++ +l+e+n+rL++e eeLr ++
  XP_022993293.1  71 RKKLSLSKHQSRLLEDIFRHNHSLNPKQKEALAMALQLKPRQVEVWFQNRRARSKLKQTEMEYQYLRRWFGSLTEQNRRLRRELEELR-AI 160
                     699************************************************************************************9.44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAFLPINSSS LDLSISMPGF ASSPPRPSAK ELDMNRVPVV GEAAEEERAV AERTEEEEES  60
CSINNGGGQP RKKLSLSKHQ SRLLEDIFRH NHSLNPKQKE ALAMALQLKP RQVEVWFQNR  120
RARSKLKQTE MEYQYLRRWF GSLTEQNRRL RRELEELRAI KVALPAVDSS HGRQPPLPVS  180
TITMCPQCKR VTAATITSSR AAATQTAIAT TATPPKAVRS ALKLQQPSQG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120128RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.16e-55HD-ZIP family protein