PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993356.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 252aa    MW: 27611.7 Da    PI: 6.7615
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.2e-18188221134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022993356.1 188 CLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGR 221
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEGSLGDEID CGNCFDHIDD LLDFSIVDDV LLTTTAAAAF PPLWSTSAAD TDICLPKLYE  60
DIIPSEWFSN LDDSFAGAGT QTVSSSSSES NKFRVSSPVS VLDNSSESSS SKRKERAHDA  120
CRRDDASSKR PRQSFFIPPP PHLVSPTSSS DSENSENYSE SCSPPPAEKK IKLSSNDAFN  180
PRGDSRKCLH CEVTKTPQWR AGPLGPKTLC NACGVRYKSG RLYPEYRPAA SPTFVSRLHS  240
NSHKKVIKMR IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-37GATA family protein