PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993357.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 225aa    MW: 24815.3 Da    PI: 5.649
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.9e-18161194134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022993357.1 161 CLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGR 194
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MEGSLGDEID CGNCFDHIDD LLDFSTEDVD DYEDIIPSEW FSNLDDSFAG AGTQTVSSSL  60
SESNKFRVSS PVSVLDNSSE SSSSKTKERA HDTCRRDDAS SKRPRQSFFI PPPPHLVSPT  120
GSSDSENSEN YGESCSPPPA EKKIKLSSND AFNPRGDSRK CLHCEVTKTP QWRAGPLGPK  180
TLCNACGVRY KSGRLYPEYR PAASPTFVSR LHSNSHKKVI EMRIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.23e-38GATA family protein