PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994154.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 547aa MW: 61851.8 Da PI: 7.3148

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.2	9.9e-16	38	119	9	97
HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 d +++ l++p fa++ ++ +k+++led+ g++W+v++ +++ g+ +++GW+ F +++ L+ gDf++F ++ + +++v+++ XP_022994154.1 38 DRFSE-VLYFPPVFAATVsRLV---NKKVVLEDSLGQQWKVTV--SNCEGSLAFREGWSAFSSEHSLEIGDFLTFNHIMD--LHFNVTIY 119 44444.4999999999986555...468*************..*****************************7754..44477766 PP
2	B3	41.3	2.8e-13	475	542	27	96
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++e+ + + l+d++ r W + + ++ +vlt+GW+ F++an++++gD ++F+++++ e+ + v+v XP_022994154.1 475 RKNPEKRRLVFLRDPRKRLWPILY--HEMPNVHVLTSGWEAFCSANKIQSGDECLFHVEDELERIYEVRV 542 567788899*************..*****************************8877555466665 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MSSEVEACSE CTKRCLHLHR KTNSLSSVTS FFKVMFGDRF SEVLYFPPVF AATVSRLVNK 60 KVVLEDSLGQ QWKVTVSNCE GSLAFREGWS AFSSEHSLEI GDFLTFNHIM DLHFNVTIYT 120 KTGCEKEFAN KSNMRKRTRS TCPVLEITNE GLTHPQASCP SVGSGSNVAL SQDKCCMTCY 180 RDLNLNLNQD KRPKYQSSNE RNGSLCKADI VDYSYAFINQ NKDIGLEENR TPLFDLFSME 240 MQTTNFCVNE ITTKKVAGDE LNPNRASTSS NAAIDVSRIN NARVDIKGDK SQCFEEADIK 300 RSVSGNNPCH DKTIEVPFIT SATNSDRNVK HFCDMPLKSV KDCQNIPAVF DTPSTITRHD 360 HQESNNKHTF PVDHSHGMKL EYPPISLEVK KCPHGDVKKT TKTEMNNYED FIGQISVSKV 420 KEELLEKSNQ SGRDGTNSNA DLIATRAHVS CIVAEDTLSF LELPTSLQSP CSRGRKNPEK 480 RRLVFLRDPR KRLWPILYHE MPNVHVLTSG WEAFCSANKI QSGDECLFHV EDELERIYEV 540 RVRKCKN

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MSSEVEACSE CTKRCLHLHR KTNSLSSVTS FFKVMFGDRF SEVLYFPPVF AATVSRLVNK  60
KVVLEDSLGQ QWKVTVSNCE GSLAFREGWS AFSSEHSLEI GDFLTFNHIM DLHFNVTIYT  120
KTGCEKEFAN KSNMRKRTRS TCPVLEITNE GLTHPQASCP SVGSGSNVAL SQDKCCMTCY  180
RDLNLNLNQD KRPKYQSSNE RNGSLCKADI VDYSYAFINQ NKDIGLEENR TPLFDLFSME  240
MQTTNFCVNE ITTKKVAGDE LNPNRASTSS NAAIDVSRIN NARVDIKGDK SQCFEEADIK  300
RSVSGNNPCH DKTIEVPFIT SATNSDRNVK HFCDMPLKSV KDCQNIPAVF DTPSTITRHD  360
HQESNNKHTF PVDHSHGMKL EYPPISLEVK KCPHGDVKKT TKTEMNNYED FIGQISVSKV  420
KEELLEKSNQ SGRDGTNSNA DLIATRAHVS CIVAEDTLSF LELPTSLQSP CSRGRKNPEK  480
RRLVFLRDPR KRLWPILYHE MPNVHVLTSG WEAFCSANKI QSGDECLFHV EDELERIYEV  540
RVRKCKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	492	KRRLVFLRDPRKR
2	481	493	KRRLVFLRDPRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	2e-14	B3 family protein