PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994225.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-X1

Protein Properties

Length: 1101aa MW: 119830 Da PI: 8.1495

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.4	5.3e-07	294	312	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+k+CH+GpC++C+ XP_022994225.1 294 CGHHRCEKICHLGPCDSCQ 312 ******************6 PP
2	zf-NF-X1	21.7	4.5e-07	416	433	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CGkH+C+ CH G+C pC XP_022994225.1 416 CGKHRCKDVCHAGDCAPC 433 ****************** PP
3	zf-NF-X1	16.2	2.4e-05	512	531	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H+C++lCH G C pCp+ XP_022994225.1 512 CGQHSCESLCHSGHCSPCPE 531 ******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1101 aa Download sequence
MSSHVRNGRK DRLRFPASSA RQTWVPRGST TTTTTTTTTT HVNQPLNVGL SDNRDGRELN 60 SSPHPVNRDG GNHGPRVHMG PRRNQRKDKE KDMEKSGDQG VKELRNSNLP QLVQEIQEKL 120 TKGTVECMIC YDMVRRSAPI WSCSSCFCIF HLTCIKKWAR APTSTDLVAE KNQGLNWRCP 180 GCQSVQLTSS KEIRYVCFCG KRQEPQSDLY LTPHSCGEPC GKPLDREMLI AGGSKENLCP 240 HNCVLQCHPG PCPPCKAFAP PRLCPCGKKL ITTRCSDRKS TLTCGQRCEK LLDCGHHRCE 300 KICHLGPCDS CQVLISASCF CKKKKELVLC GSITLKGEVN AEDGVFPCSS ICGKILNCRN 360 HFCSEICHPG PCGGCVLVPD MIKTCYCGKT PLQKERSSCL DPIPVCSELC EKLLPCGKHR 420 CKDVCHAGDC APCLVQVVQK CRCGSTSQNV ECYKTSSPTD IFTCEKPCGW KKNCGRHRCS 480 ERCCPLSNSS YSHSGDWDPH FCVLRCGKKL RCGQHSCESL CHSGHCSPCP ETIFTDLTCA 540 CGKTSIPPPL PCGTPPPSCQ LPCSVPQPCG HSSTHSCHFG DCPPCTVPIA KECIGGHVVL 600 RNIPCGSRDI RCNKLCGKTR QCGIHACNRT CHPPPCDTSA GSDSGQITSC GQTCGAPRRD 660 CRHTCTAPCH RSAPCPDARC EFPVIITCSC GRITASVPCD AGGSGTGFNT DTLYASIIQK 720 LPAPLQPIEA TSKKVPLGQR KLMCDDECSK LERKRVLADA FDINPPNMDA LHFGDSSASE 780 LLADLFRRDS KWVLSVEERC KFLVLGKNRG AMSGLKVHVF CPMPKDKRDA VRLISERWKL 840 AINSVGWEPK RFIAIHVTPK SKVPPRVLGI KGSTTTSTPH PPAYDPLVDM DPRLVVSFPD 900 LPREADISAL VLRFGGECEL VWLNDKNALA VFSDPARAAT AMRRLDHGTA YHGASFLQNG 960 GASASSNGNA WGGENANKEG GALKSSNPWK RAVVQDSSWK ETSWGDEEWS GPSIDVQASV 1020 WKREAPLPAS LNRWHALDPE SSGSSSAQSV EHNPGSRVGR SSSSGSESGT SRSLNSLGTQ 1080 VVADNETNMS EVADDWEKAY D

Sequence ? help Back to Top

Protein Sequence Length: 1101 aa Download sequence

MSSHVRNGRK DRLRFPASSA RQTWVPRGST TTTTTTTTTT HVNQPLNVGL SDNRDGRELN  60
SSPHPVNRDG GNHGPRVHMG PRRNQRKDKE KDMEKSGDQG VKELRNSNLP QLVQEIQEKL  120
TKGTVECMIC YDMVRRSAPI WSCSSCFCIF HLTCIKKWAR APTSTDLVAE KNQGLNWRCP  180
GCQSVQLTSS KEIRYVCFCG KRQEPQSDLY LTPHSCGEPC GKPLDREMLI AGGSKENLCP  240
HNCVLQCHPG PCPPCKAFAP PRLCPCGKKL ITTRCSDRKS TLTCGQRCEK LLDCGHHRCE  300
KICHLGPCDS CQVLISASCF CKKKKELVLC GSITLKGEVN AEDGVFPCSS ICGKILNCRN  360
HFCSEICHPG PCGGCVLVPD MIKTCYCGKT PLQKERSSCL DPIPVCSELC EKLLPCGKHR  420
CKDVCHAGDC APCLVQVVQK CRCGSTSQNV ECYKTSSPTD IFTCEKPCGW KKNCGRHRCS  480
ERCCPLSNSS YSHSGDWDPH FCVLRCGKKL RCGQHSCESL CHSGHCSPCP ETIFTDLTCA  540
CGKTSIPPPL PCGTPPPSCQ LPCSVPQPCG HSSTHSCHFG DCPPCTVPIA KECIGGHVVL  600
RNIPCGSRDI RCNKLCGKTR QCGIHACNRT CHPPPCDTSA GSDSGQITSC GQTCGAPRRD  660
CRHTCTAPCH RSAPCPDARC EFPVIITCSC GRITASVPCD AGGSGTGFNT DTLYASIIQK  720
LPAPLQPIEA TSKKVPLGQR KLMCDDECSK LERKRVLADA FDINPPNMDA LHFGDSSASE  780
LLADLFRRDS KWVLSVEERC KFLVLGKNRG AMSGLKVHVF CPMPKDKRDA VRLISERWKL  840
AINSVGWEPK RFIAIHVTPK SKVPPRVLGI KGSTTTSTPH PPAYDPLVDM DPRLVVSFPD  900
LPREADISAL VLRFGGECEL VWLNDKNALA VFSDPARAAT AMRRLDHGTA YHGASFLQNG  960
GASASSNGNA WGGENANKEG GALKSSNPWK RAVVQDSSWK ETSWGDEEWS GPSIDVQASV  1020
WKREAPLPAS LNRWHALDPE SSGSSSAQSV EHNPGSRVGR SSSSGSESGT SRSLNSLGTQ  1080
VVADNETNMS EVADDWEKAY D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein