PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994420.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 342aa MW: 38148.2 Da PI: 6.9081

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	1e-09	164	211	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++sLq XP_022994420.1 164 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 211 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAAFSYQYQP FLLDSILQAN NTLKMGGFLD EPNFNINCFT QFFPQEQEPE QPIYCFPELC 60 KQSPESFSLV EKSDSGEPVS QLKPVVTSAC SKKRKGRGNN SSANSAQSKE SIGKKVKTKR 120 ELDERKEGDE KGKTGKKEEK QGSEDGAPTG YVHVRAKRGQ ATDSHSLAER VRREKISERM 180 KTLQRLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LTSLNPIFFD FRMDLDGLMI 240 QPESSSLSSI TPQLPAMAQC SVISPPTLID TTTTTTPTPT IATNTYPLID NSANLFLLQP 300 VMNPNAYIQS QDNVKVSSWD VEEHKRKLLI SSGIGDNLSY FH

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAAFSYQYQP FLLDSILQAN NTLKMGGFLD EPNFNINCFT QFFPQEQEPE QPIYCFPELC  60
KQSPESFSLV EKSDSGEPVS QLKPVVTSAC SKKRKGRGNN SSANSAQSKE SIGKKVKTKR  120
ELDERKEGDE KGKTGKKEEK QGSEDGAPTG YVHVRAKRGQ ATDSHSLAER VRREKISERM  180
KTLQRLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LTSLNPIFFD FRMDLDGLMI  240
QPESSSLSSI TPQLPAMAQC SVISPPTLID TTTTTTPTPT IATNTYPLID NSANLFLLQP  300
VMNPNAYIQS QDNVKVSSWD VEEHKRKLLI SSGIGDNLSY FH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	119	KKRKGRGNNSSANSAQSKESIGKKVKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-54	bHLH family protein