PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995105.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 363aa MW: 37868.9 Da PI: 7.5008

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	218.9	1.1e-67	143	300	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 s t++CqdCGnqakkdC+h+RCRtCC+srgfdC+thvkstWvpaa+rrerq + aa++ a +s +++ +k++r +++++s+t++s+++++ XP_022995105.1 143 SATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQLMGVAANAAAGSSGSTSGAKKPRLI---ASQTTSRTSTSNTTPP 234 57899*******************************************99999999999998899999999986...6667778888999999 PP DUF702 98 keletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++l+tss lP +v+++avf+cvrv++vddg++e+aYq++v+igGh+fkG+LydqG+e XP_022995105.1 235 RSLDTSSshqdagfpeaLPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQGVE 300 9999999999****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MWSAAAASQR SLNYGLGSEM SMVGLRDVFV VAPASSFNPN PHPHDNNLLS DPHSLAVSNP 60 ATALGVGVIP LLTAGPCLGV EEDNLLSNRS SNRGGGIQLW QQNHYLKKMP SSLDNHLHNP 120 SAANNGLIDD GIGITGGLAS SSSATTTCQD CGNQAKKDCS HRRCRTCCRS RGFDCTTHVK 180 STWVPAARRR ERQLMGVAAN AAAGSSGSTS GAKKPRLIAS QTTSRTSTSN TTPPRSLDTS 240 SSHQDAGFPE ALPGQVRAPA VFKCVRVTAV DDGDDEYAYQ AVVKIGGHIF KGFLYDQGVE 300 PGDEFPNVSE LHLGDGGGLT RNNRNGVSSS SPLVDPSDVY NAAATGGGAP CFLGGSNYGN 360 QIS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MWSAAAASQR SLNYGLGSEM SMVGLRDVFV VAPASSFNPN PHPHDNNLLS DPHSLAVSNP  60
ATALGVGVIP LLTAGPCLGV EEDNLLSNRS SNRGGGIQLW QQNHYLKKMP SSLDNHLHNP  120
SAANNGLIDD GIGITGGLAS SSSATTTCQD CGNQAKKDCS HRRCRTCCRS RGFDCTTHVK  180
STWVPAARRR ERQLMGVAAN AAAGSSGSTS GAKKPRLIAS QTTSRTSTSN TTPPRSLDTS  240
SSHQDAGFPE ALPGQVRAPA VFKCVRVTAV DDGDDEYAYQ AVVKIGGHIF KGFLYDQGVE  300
PGDEFPNVSE LHLGDGGGLT RNNRNGVSSS SPLVDPSDVY NAAATGGGAP CFLGGSNYGN  360
QIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.4	5e-66	SRS family protein