PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995231.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 689aa MW: 75563 Da PI: 4.8569

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	506	551	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_022995231.1 506 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 551 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MTDCRLPSVM NFWADENASM MDAFMSTDLN SFWVTPPQPQ QQQLPQQPYA SVSAASDPSK 60 AVGQSLPPSS MAVFNQETLQ QRLQALIEGA QESWTYAIFW QSSYDCSGAT VLGWGDGYYK 120 GEEDKGKEKA KSSTSKSEQE YRKKVLRELN SLISGSPSSE DDAVDEVVTD TEWFFLVSMT 180 QSFVSGVGLP GQAFFDSNPI WVAGSDRLAG SFCERARQGQ VFGLQTVVCI PSANGVVELG 240 SSELICQSSD LMNKVRVLFN FNNLEVETWP ISGVDQGEND PSSLWITEPS NAIEIKDPAT 300 VSTNNNNNNP VPSAPTPTTT NSQPISKITS QIETPKSSVV TETPTSVPPP QNSHRQSQPV 360 QTQSFFTREL NFSEFGYDNS SLKDGNSHSL KPESGEILNF GESKRSSFPK TDTLPSGNSQ 420 FGADENKKRS PPSRGSNEEG MLSFTSGVIL PSSGALKSGG GIGDSDHSDL EASVIREVES 480 SRAVEPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL 540 LGDAISYINE LRGKLQTADS DKEDLQKQLD SVKKLMMSNK DSCISTSNQP PPDEDIKASN 600 IHGNHSGIET DVDVKIISWD AMIRIQSSKK NHPAARLMAA LEELDLDINH ASISVVNDLM 660 IQQATVKMSR LYTQEQLRLA LSSKLGAPR

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MTDCRLPSVM NFWADENASM MDAFMSTDLN SFWVTPPQPQ QQQLPQQPYA SVSAASDPSK  60
AVGQSLPPSS MAVFNQETLQ QRLQALIEGA QESWTYAIFW QSSYDCSGAT VLGWGDGYYK  120
GEEDKGKEKA KSSTSKSEQE YRKKVLRELN SLISGSPSSE DDAVDEVVTD TEWFFLVSMT  180
QSFVSGVGLP GQAFFDSNPI WVAGSDRLAG SFCERARQGQ VFGLQTVVCI PSANGVVELG  240
SSELICQSSD LMNKVRVLFN FNNLEVETWP ISGVDQGEND PSSLWITEPS NAIEIKDPAT  300
VSTNNNNNNP VPSAPTPTTT NSQPISKITS QIETPKSSVV TETPTSVPPP QNSHRQSQPV  360
QTQSFFTREL NFSEFGYDNS SLKDGNSHSL KPESGEILNF GESKRSSFPK TDTLPSGNSQ  420
FGADENKKRS PPSRGSNEEG MLSFTSGVIL PSSGALKSGG GIGDSDHSDL EASVIREVES  480
SRAVEPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL  540
LGDAISYINE LRGKLQTADS DKEDLQKQLD SVKKLMMSNK DSCISTSNQP PPDEDIKASN  600
IHGNHSGIET DVDVKIISWD AMIRIQSSKK NHPAARLMAA LEELDLDINH ASISVVNDLM  660
IQQATVKMSR LYTQEQLRLA LSSKLGAPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	488	496	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-171	bHLH family protein