PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995479.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 282aa    MW: 31562.7 Da    PI: 6.6584
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.91.1e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l d v++ G g+W++ +++ g++R++k+c++rw +yl
   XP_022995479.1 14 KGPWTPEEDEKLFDFVAKNGHGSWRALPKCAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding56.56.3e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+  +++++k lG++ W++Ia++++ gRt++++k++w+++l
   XP_022995479.1  67 RGNFSKEEESSIIELHKTLGNR-WSKIASHLP-GRTDNEIKNFWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGRSPCCDEP GVKKGPWTPE EDEKLFDFVA KNGHGSWRAL PKCAGLNRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEESSIIE LHKTLGNRWS KIASHLPGRT DNEIKNFWNT HLRKKLLEMG  120
IDPKTHKPRT DLLNLSTLIN GINNPLNSDY LKVQTEIAKL QVLDNICQLL NPTTINEPPN  180
PNPSQFQADF STRLAPGSGF ENGLVGLETG DVNYYPLPPL ISESPGSTSN VNQIECGTYP  240
FSGFPKPPSI FDTLESMMNE EPSESYWTRL LQSTIEGGVC IT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.26e-83MYB family protein