PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995531.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 226aa    MW: 25698.9 Da    PI: 9.758
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC43.38e-141162051099
           NF-YC  10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                      e+++  k  ++P+ rikki + ++   +i  ea  l+ ka e+f++++   ++  +   ++++l    ++++v++ + +dfl d vp++
  XP_022995531.1 116 EEEEAHEKIYTFPMQRIKKITRDENSDFRINQEALFLVNKATEMFLVQFCKDAYACCSRDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK 205
                     44555567789***********9999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MASTKKSNAE IKSKEAGTSK PATKTKTLNA RKSDKNDSKK KKKKKKIYSN KHSNNGSVKE  60
DDAVFISAPG SASEEEDAGE DRAETRSKEA KTSKSKVGKW NHVKKEENGY AEQEEEEEEA  120
HEKIYTFPMQ RIKKITRDEN SDFRINQEAL FLVNKATEMF LVQFCKDAYA CCSRDRKKSL  180
AYKHLSSVVS KRKRYDFLSD FVPEKLKFED ALKEIGMAES GKDEAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13945KKKKKKK
24046KKKKKKK
3176194RKKSLAYKHLSSVVSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.13e-32NF-YC family protein