PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995783.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 231aa    MW: 25570.9 Da    PI: 8.6184
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2282.4e-70231902170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh...ldeslkeelleelkveeenlksnvekeesas 93 
                     ++  s+eq+Cyv+Cn C+t+lavsvP +slfk+vtvrCGhCt+ll vn++    ll++ ++   l++s+  + ++ l++  +  + + +++ +a+
  XP_022995783.1  23 HHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGL--LLPSANQfhqLGHSFFSPSHNILENIPTPNSNYLINQFAAT 115
                     67889*****************************************777665..55555540015566555533333333333222333333333 PP

           YABBY  94 tsvssekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++   + + s+   +e+pr+p ++rPPekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  XP_022995783.1 116 NT---FGMpSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 190
                     33...3332778899****999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSSSSSPTSS TTTTTTTQQQ LDHHLPSPEQ LCYVHCNICD TVLAVSVPCS SLFKTVTVRC  60
GHCTNLLPVN MRGLLLPSAN QFHQLGHSFF SPSHNILENI PTPNSNYLIN QFAATNTFGM  120
PSRGVADELP RPPVINRPPE KRQRVPSAYN RFIKDEIQRI KSVNPDISHR EAFSAAAKNW  180
AHFPHIHFGL MPDQTVKKTN IRQQEGDHGS VVMKDNGFYA AASPNVGVSH F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.13e-80YABBY family protein