PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995932.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 470aa MW: 52842.7 Da PI: 5.208

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.5	1.3e-27	235	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022995932.1 235 KTKVDWSPELHRKFIRAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 288 6799***************.******************************8 PP
2	Myb_DNA-binding	41.6	3e-13	238	287	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022995932.1 238 VDWSPELHRKFIRAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 287 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLMCEGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLRNIW 60 QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNTGVLEDTE VLSWIQDVVW EQEQPEGSVI 120 YQLNQGSSLQ GCWESENQMN RPMETDCSDK DVRSNFVETA SHDLVCEDTL QEGQPRLSGE 180 VMLEGDRNFV VGLNAESDLY LPLQNKSGVK SGPSAAEHSI QGSDVNPSAS SKARKTKVDW 240 SPELHRKFIR AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQR KHVMQREENL 300 TRYSMQTNHS PPIMAYPSYP YCGISMSTVY RTWTQTNGHP ANVNMRGPPD YRHWPQPGTQ 360 PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ QISASHNVYT ANKGYGTPQI SFDLQPNEEL 420 IDEIVNEAKR KPWSPLPLGL KPPSAEILVE ELPKQGISTL TPQINAFNPP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLMCEGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLRNIW  60
QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNTGVLEDTE VLSWIQDVVW EQEQPEGSVI  120
YQLNQGSSLQ GCWESENQMN RPMETDCSDK DVRSNFVETA SHDLVCEDTL QEGQPRLSGE  180
VMLEGDRNFV VGLNAESDLY LPLQNKSGVK SGPSAAEHSI QGSDVNPSAS SKARKTKVDW  240
SPELHRKFIR AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQR KHVMQREENL  300
TRYSMQTNHS PPIMAYPSYP YCGISMSTVY RTWTQTNGHP ANVNMRGPPD YRHWPQPGTQ  360
PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ QISASHNVYT ANKGYGTPQI SFDLQPNEEL  420
IDEIVNEAKR KPWSPLPLGL KPPSAEILVE ELPKQGISTL TPQINAFNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-67	ARR-B family protein