PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996005.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 308aa    MW: 33913.5 Da    PI: 8.8556
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.4e-125195147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_022996005.1 51 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 95
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVSNNPNPSE GFYLDPSGMA LPGLGPFATT MAASEDMSKK IRKPYTITKS RESWTEPEHD  60
KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ KTGGGEHLPP PRPKRKAAHP  120
YPQKASKNVA MPSQVSGSFP STSSLVEPGC IIRRPESSSI PACPATGGAV SSWMVNSVQP  180
PNSAQVPTTT NICCSSTESP SKARPLVETT DQGSNNHSLR VLPDFAQVYS FIGSVFDPNA  240
SGHLQKLKRM DPIDVETVLL LMRNLSINLI SPDFEDHRKL LSSYEIDSGR EELMNKYVTD  300
HKPSLVSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-113MYB_related family protein