PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996215.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 514aa    MW: 57911.4 Da    PI: 5.0809
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.31.4e-27279332155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+
  XP_022996215.1 279 KTKVDWSPELHRKFIRAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 332
                     6799*****************.********************************8 PP
2Myb_DNA-binding41.43.3e-13282331248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        W++e++ ++++av+qlG +   +++I + m  +g+t+ ++ s++qky+
   XP_022996215.1 282 VDWSPELHRKFIRAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 331
                      57***********************************************7 PP
3Response_reg25.66.1e-10211262109
                     EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
    Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                     l+ d +   +  +++ le+ +y +v  ++d +e l ++ +    +++ +l +   +    e +k + +++ +lpii++++    +++ +++ +Ga
  XP_022996215.1  21 LLLDRDGHSAAEITSKLEEMEY-VVCYCSDEKETLSTILNTSenFHVAILEMCKGN--YDESFKLLGSSK-DLPIIMISDVYCLSTMMKCIALGA 111
                     5666666667778888999***.9***********999555545999999866555..458888887766.8*********************** PP

                     SEEEESS--HHHHHH CS
    Response_reg  95 kdflsKpfdpeelvk 109
                      +fl Kp ++++l++
  XP_022996215.1 112 VEFLLKPLSEDKLRN 126
                     ************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MVCTADDLQE WKDFPKGLRV LLLDRDGHSA AEITSKLEEM EYVVCYCSDE KETLSTILNT  60
SENFHVAILE MCKGNYDESF KLLGSSKDLP IIMISDVYCL STMMKCIALG AVEFLLKPLS  120
EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN TGVLEDTEVL SWIQDVVWEQ  180
EQPEGSVIYQ LNQGSSLQGC WESENQMNRP METDCSDKDV RSNFVETASH DLVCEDTLQE  240
GQPRLSGENK SGVKSGPSAA EHSIQGSDVN PSASSKARKT KVDWSPELHR KFIRAVEQLG  300
IDRAIPSKIL ELMKVEGLTR HNVASHLQKY RMQRKHVMQR EENLTRYSMQ TNHSPPIMAY  360
PSYPYCGISM STVYRTWTQT NGHPANVNMR GPPDYRHWPQ PGTQPWNSYA GMQADAWGCP  420
VMLPSRAPYF SYPQQISASH NVYTANKGYG TPQISFDLQP NEELIDEIVN EAKRKPWSPL  480
PLGLKPPSAE ILVEELPKQG ISTLTPQINA FNPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.33e-94ARR-B family protein