PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996356.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 234aa    MW: 26326.6 Da    PI: 4.9823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-1886137256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_022996356.1  86 NYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAYSMRGA 137
                     59*******.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MESYYFSFSD SDFSTECSLG SPEELSFSWS DFFSINSVLE NSLSLPDEFV GHQPSESELK  60
IAVKEEIEVS SIDLEREKER KTTEKNYRGV RRRPWGKYAA EIRDSTRHGV RVWLGTFDSA  120
EAAALAYDQA AYSMRGALAV LNFPVEMVRE SLQEIKYELE EGLSPVVALK RKHSLRRKSG  180
AAAKIQGVAE TKKMKKKKNV VVILEDLGTE YLEELLMLSS CESSSSSSSS MSPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176198RRKSGAAAKIQGVAETKKMKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-42ERF family protein