PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996358.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 465aa MW: 51608.7 Da PI: 6.7939

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.7	1.6e-16	234	280	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_022996358.1 234 VHNLSERRRRDRINEKMKALQELIPRC-----NKADKASMLDEAIEYLKSLQ 280 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MQEDEMISWL HYPLVDDSTL ENSLCNELLY PSQPQSIEQN VGDSSQVRTS HGMEFRPLTS 60 MTTTISRMTS RPPIPPTRRT EPETKMSSFG LFSRHTERLE SGPSKSKREV RESPVVGSTW 120 GDTTWLTPES TASDLQRTAV VDASSGDLAC RVMSGGGLTA TSSGNDGGLM NMTGAETDPA 180 IQRTTSFEDR KRKGKETDDS DYKCRSTDVE FESTDAKKQG RGSTSTKRSR ASEVHNLSER 240 RRRDRINEKM KALQELIPRC NKADKASMLD EAIEYLKSLQ FQVQFLWRWS MVCGLVPMMS 300 PGVQQFMPPM PMGLGMGMET SVNLPMMPDR NMLAGSTFPS PAGAAQIGST FTHPVFHMAH 360 VPNTDPSRTQ GTNLSEHMHS LSEMQNINHP RFSSSLDGYQ QFLGSQQMQV PAAASQQPSP 420 QNQLAALPRS PNQHTSRGLE SIDNNREPGN PSMDPCLNRR KHESS

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MQEDEMISWL HYPLVDDSTL ENSLCNELLY PSQPQSIEQN VGDSSQVRTS HGMEFRPLTS  60
MTTTISRMTS RPPIPPTRRT EPETKMSSFG LFSRHTERLE SGPSKSKREV RESPVVGSTW  120
GDTTWLTPES TASDLQRTAV VDASSGDLAC RVMSGGGLTA TSSGNDGGLM NMTGAETDPA  180
IQRTTSFEDR KRKGKETDDS DYKCRSTDVE FESTDAKKQG RGSTSTKRSR ASEVHNLSER  240
RRRDRINEKM KALQELIPRC NKADKASMLD EAIEYLKSLQ FQVQFLWRWS MVCGLVPMMS  300
PGVQQFMPPM PMGLGMGMET SVNLPMMPDR NMLAGSTFPS PAGAAQIGST FTHPVFHMAH  360
VPNTDPSRTQ GTNLSEHMHS LSEMQNINHP RFSSSLDGYQ QFLGSQQMQV PAAASQQPSP  420
QNQLAALPRS PNQHTSRGLE SIDNNREPGN PSMDPCLNRR KHESS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	239	244	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	2e-44	bHLH family protein