PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996379.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 471aa MW: 52869.8 Da PI: 6.5089

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	236	289	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022996379.1 236 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 289 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	239	288	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022996379.1 239 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 288 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MMVEREKKLQ PRRKFVDAAN SCLFHLTSDV YCLSTMMKCI ALGAVEFLLK PLSEDKLRNI 60 WQHVLHKAFS STPKPEVDSA ASLMQLQLES EDNNGVLEDT EGLSWIQDIV WEQEQPEGNV 120 NSQLNQGSSM QGCWESGDQM NCPMETDCSD KDVQSNFVET TSHDLVCEDT LQERQPRLSG 180 NVMVKEDENS AVGLIAESDI YLPLQNKCGV KSGPSAAEHS IQGSDVNPSA GSKSKKTKVD 240 WSPELHRKFI QAVEQLGIDR AIPSKILELM KVEGLTRHNV ASHLQKYRMQ KKHAVHREEN 300 PRFSMLTNHL KPNMAYLSYY PYCGISMSAV YRTWIQNNGQ PASVNMWGPP DYRHWPQPGT 360 QPWNSYAGMQ ADAWGCPVML PSRAPYFSYP QQISSSHNVY TANESYGTPH SSFDIQPDEE 420 LIDKIVKEAR RKPLSPLPLG LKPPSAESVL KELSKKGIST VPPRINGSKP P

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MMVEREKKLQ PRRKFVDAAN SCLFHLTSDV YCLSTMMKCI ALGAVEFLLK PLSEDKLRNI  60
WQHVLHKAFS STPKPEVDSA ASLMQLQLES EDNNGVLEDT EGLSWIQDIV WEQEQPEGNV  120
NSQLNQGSSM QGCWESGDQM NCPMETDCSD KDVQSNFVET TSHDLVCEDT LQERQPRLSG  180
NVMVKEDENS AVGLIAESDI YLPLQNKCGV KSGPSAAEHS IQGSDVNPSA GSKSKKTKVD  240
WSPELHRKFI QAVEQLGIDR AIPSKILELM KVEGLTRHNV ASHLQKYRMQ KKHAVHREEN  300
PRFSMLTNHL KPNMAYLSYY PYCGISMSAV YRTWIQNNGQ PASVNMWGPP DYRHWPQPGT  360
QPWNSYAGMQ ADAWGCPVML PSRAPYFSYP QQISSSHNVY TANESYGTPH SSFDIQPDEE  420
LIDKIVKEAR RKPLSPLPLG LKPPSAESVL KELSKKGIST VPPRINGSKP P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-65	ARR-B family protein