PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996380.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 470aa MW: 52557.4 Da PI: 5.7628

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	235	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022996380.1 235 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 288 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	238	287	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022996380.1 238 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 287 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLMCEGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLRNIW 60 QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNNGVLEDTE GLSWIQDIVW EQEQPEGNVN 120 SQLNQGSSMQ GCWESGDQMN CPMETDCSDK DVQSNFVETT SHDLVCEDTL QERQPRLSGN 180 VMVKEDENSA VGLIAESDIY LPLQNKCGVK SGPSAAEHSI QGSDVNPSAG SKSKKTKVDW 240 SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP 300 RFSMLTNHLK PNMAYLSYYP YCGISMSAVY RTWIQNNGQP ASVNMWGPPD YRHWPQPGTQ 360 PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ QISSSHNVYT ANESYGTPHS SFDIQPDEEL 420 IDKIVKEARR KPLSPLPLGL KPPSAESVLK ELSKKGISTV PPRINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLMCEGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLRNIW  60
QHVLHKAFSS TPKPEVDSAA SLMQLQLESE DNNGVLEDTE GLSWIQDIVW EQEQPEGNVN  120
SQLNQGSSMQ GCWESGDQMN CPMETDCSDK DVQSNFVETT SHDLVCEDTL QERQPRLSGN  180
VMVKEDENSA VGLIAESDIY LPLQNKCGVK SGPSAAEHSI QGSDVNPSAG SKSKKTKVDW  240
SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP  300
RFSMLTNHLK PNMAYLSYYP YCGISMSAVY RTWIQNNGQP ASVNMWGPPD YRHWPQPGTQ  360
PWNSYAGMQA DAWGCPVMLP SRAPYFSYPQ QISSSHNVYT ANESYGTPHS SFDIQPDEEL  420
IDKIVKEARR KPLSPLPLGL KPPSAESVLK ELSKKGISTV PPRINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-69	ARR-B family protein