PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996407.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 287aa    MW: 32443.6 Da    PI: 8.1658
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.0013172193223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C+k+F++   L +H + +
  XP_022996407.1 172 KCQKCTKHFRSYRALFSHEKIC 193
                     7*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDSHKCKLCS RLFTNGRALG GHMKAHLTAA PALPLPPSKP PTIHVALPSS TSSSSAAADD  60
SLESEHDPTL YEVRENPNTN FRFSDPVFDI VLQDRESETD SRNPTCNRSK RRRQPPLEPP  120
EPASSVSYTS PEEDLAMCLM MLSRDRRIEN QNQIPNQFEK IRAKKPLRRK KKCQKCTKHF  180
RSYRALFSHE KICQLKTELE EEEEEEEKQE HFKNGGNRRR IFKCPFCFKL FGSGQALGGH  240
KRSHFVSSTN GGVSVDSSVS LKMEISLIDL NLPAPLEEDD YSVVSNA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160171KIRAKKPLRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.11e-23C2H2 family protein