PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996424.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 466aa MW: 51902.6 Da PI: 4.8839

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.5	7.1e-34	245	299	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLH++Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_022996424.1 245 KPRMRWTPELHDAFVEAVNKLGGSERATPKGVLKLMQVEGLTIYHVKSHLQKYRT 299 79****************************************************8 PP
2	Myb_DNA-binding	55.7	1.1e-17	247	298	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_022996424.1 247 RMRWTPELHDAFVEAVNKLGGSeraTPKGVLKLMQvEGLTIYHVKSHLQKYR 298 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MKFVPSFDLR MKIEASLVSS IASSSARQHS SAGVNEDISK PLRVLLPTCL EEVYPKLPDS 60 QQVSMERELV SRPLVHSNHL HSSSGVVGNI FSSSPGFSTD LHYSSVSFYE NQSSTNHPTG 120 ENVNSWCTDA LPDFLEAPEN NPVGNSHVEN NSCSSLMVSD EFSKENDWQD WTDRIITDDS 180 LTSNWSDLLV DANVADLEPK IAYQASKPVI KMQVQQSQIQ NQLPSSGEIS MIATSTPSSN 240 GAPSKPRMRW TPELHDAFVE AVNKLGGSER ATPKGVLKLM QVEGLTIYHV KSHLQKYRTA 300 RYQPESSKGS MEKSTTSLED ISSLDLKTSI DITEALRLQM EVQKKLHEQL EIQRNLQLRI 360 EEQGKYLQMM FEKQFKSGNN LKASTLDESP FSDTVDDFSA KTELETSQVE ICTARTDPSE 420 ADTISENVTN EEGGKPEARH RKVPENTEPD ASKSSSQLSK RQRTEN

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MKFVPSFDLR MKIEASLVSS IASSSARQHS SAGVNEDISK PLRVLLPTCL EEVYPKLPDS  60
QQVSMERELV SRPLVHSNHL HSSSGVVGNI FSSSPGFSTD LHYSSVSFYE NQSSTNHPTG  120
ENVNSWCTDA LPDFLEAPEN NPVGNSHVEN NSCSSLMVSD EFSKENDWQD WTDRIITDDS  180
LTSNWSDLLV DANVADLEPK IAYQASKPVI KMQVQQSQIQ NQLPSSGEIS MIATSTPSSN  240
GAPSKPRMRW TPELHDAFVE AVNKLGGSER ATPKGVLKLM QVEGLTIYHV KSHLQKYRTA  300
RYQPESSKGS MEKSTTSLED ISSLDLKTSI DITEALRLQM EVQKKLHEQL EIQRNLQLRI  360
EEQGKYLQMM FEKQFKSGNN LKASTLDESP FSDTVDDFSA KTELETSQVE ICTARTDPSE  420
ADTISENVTN EEGGKPEARH RKVPENTEPD ASKSSSQLSK RQRTEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-104	G2-like family protein