PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996495.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 214aa    MW: 23784.7 Da    PI: 4.3115
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.56.7e-36171171100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+ap f  ++ +++fa+vhk+FGasnv+kll +lp + r++a+ ++ yeA  r+rdP yG+v++i++lqq++++l++e+
  XP_022996495.1  17 SCGACKFLRRKCSNHCVFAPFFTYDEaTSHFAAVHKVFGASNVSKLLLHLPMHVRSHAAITVSYEALERMRDPTYGCVAHIFTLQQEIMSLQEEI 111
                     6*********************998868******************************************************************* PP

          DUF260  95 allkee 100
                     ++l+++
  XP_022996495.1 112 DMLGSQ 117
                     999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MTGLTSSSSS SSSSSSSCGA CKFLRRKCSN HCVFAPFFTY DEATSHFAAV HKVFGASNVS  60
KLLLHLPMHV RSHAAITVSY EALERMRDPT YGCVAHIFTL QQEIMSLQEE IDMLGSQIAN  120
FTTDMDNVAV VENPSMELQV SKQLNELVMN TNDYQNELLS QLPTFDEVQI NDAQMISPLF  180
CIGEEEGFFG CNPNNAMENS AFDVSVDENF AYLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.18e-59LBD family protein