PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996578.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 341aa    MW: 37874.3 Da    PI: 6.658
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15e-18231265135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022996578.1 231 CMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 265
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEPPEHFHLK AYTSTHSSSD HHHTAAAEHD LFFVENLLDF SDDHHADADA DAGLLSDNTN  60
NNHHNTNTPS SCFHDNGNSA QLTSFLDHVN LPDAHFSAEL AIPYDDLLEL EWLSNFVEEC  120
EYIQNLELIT GVKVKPHEPT AVPPRNAAAI FNPGVVSVPA KARSKRSRAV VSNWNNSLLL  180
PLSPTTSSSE SDINAEPPQL VKKAPPKAVV TAKKKDSPEG GVSPAGEERR CMHCATDKTP  240
QWRTGPMGPK TLCNACGVRY KSGRLVPEYR PAASPTFVLT KHSNSHRKVM ELRRQKEIIR  300
GQQQPQPLVL DHHRQDLIFD ASSCDNYLIH QHVGPDFRQL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-77GATA family protein