PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996873.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 545aa MW: 61506.6 Da PI: 5.1316

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.5	6.9e-24	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+++ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022996873.1 200 KARVVWSVDLHQKFVKAVDHI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253 68*****************.9*****************************8 PP
2	Myb_DNA-binding	34.5	4.9e-11	202	252	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av G + +k+I m+ +t++++ s++qky+ XP_022996873.1 202 RVVWSVDLHQKFVKAVDHIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 252 678***********************************************7 PP
3	Response_reg	82.6	1.3e-27	21	129	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_022996873.1 21 VLVVDDDPTWLRILEKMLKKCSY-EVTTCCLAREALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 113 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_022996873.1 114 ACDYLLKPIRMKELRN 129 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MVMENGFSSP RSDAFPVGLR VLVVDDDPTW LRILEKMLKK CSYEVTTCCL AREALSLLRE 60 RKDGYDIVIS DVNMPDMDGF KLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK 120 PIRMKELRNI WQHVLRKKIQ EGRDIEGHDV LEGIQILRNG SDRYDDSQFL RGEELFSLRK 180 RKDIDKHEDR EFCDTTSTKK ARVVWSVDLH QKFVKAVDHI GFDKVGPKKI LDLMNVPWLT 240 RENVASHLQK YRLYLSRLQK ENDPKACFVV GMKHTDSCSN DRDGNFSLCS SLAGPQTDVT 300 NSSFSFSGDN FLLQNDSSEP KRAAAAARSV PEPIKLAAFD PSKRTCYPWI DAPETKFKQE 360 IKPVVHSEGD FSQFPATVLP HHVQIDQLQS ISSISSGRSA TEKDIASSIE SKPMYSEECS 420 QQMVHVNLPK VPTDPSSTTT TTTAAATTPL GKKNQSLNLS SISTDIGSGL PFESFDEDLQ 480 GYLLQDGCYP KNLDHQQIIE FPDYGDPGLF TEVPAYLYDA MRFGYEYSYD PTEYYPVIDE 540 GLFIA

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MVMENGFSSP RSDAFPVGLR VLVVDDDPTW LRILEKMLKK CSYEVTTCCL AREALSLLRE  60
RKDGYDIVIS DVNMPDMDGF KLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK  120
PIRMKELRNI WQHVLRKKIQ EGRDIEGHDV LEGIQILRNG SDRYDDSQFL RGEELFSLRK  180
RKDIDKHEDR EFCDTTSTKK ARVVWSVDLH QKFVKAVDHI GFDKVGPKKI LDLMNVPWLT  240
RENVASHLQK YRLYLSRLQK ENDPKACFVV GMKHTDSCSN DRDGNFSLCS SLAGPQTDVT  300
NSSFSFSGDN FLLQNDSSEP KRAAAAARSV PEPIKLAAFD PSKRTCYPWI DAPETKFKQE  360
IKPVVHSEGD FSQFPATVLP HHVQIDQLQS ISSISSGRSA TEKDIASSIE SKPMYSEECS  420
QQMVHVNLPK VPTDPSSTTT TTTAAATTPL GKKNQSLNLS SISTDIGSGL PFESFDEDLQ  480
GYLLQDGCYP KNLDHQQIIE FPDYGDPGLF TEVPAYLYDA MRFGYEYSYD PTEYYPVIDE  540
GLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-125	ARR-B family protein