PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997187.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 326aa    MW: 35870.2 Da    PI: 5.036
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA46.45.5e-15202238135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ +  Tp +Rrgp g +tLCnaCGl+++ kg+
  XP_022997187.1 202 CQHCGVNEnnTPAMRRGPAGLRTLCNACGLMWANKGT 238
                     *******999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAAANPQPLQ ARPFQEHVQV PTMMGNDDGE YEDDGGGGGD VMDDVEGAHM TSVSVVKHGG  60
LVMVSRTSEL TLSFEGEVYV FPAVTPEKVQ AVLLLLGGRD VPTGVPTMEV PYDDNNRGMV  120
DTPKRSNLSR RIASLVRFRE KRKERCFDKK IRYTVRKEVA QRMHRKNGQF ASLKEGSGAS  180
SWESAHSCLQ DGSRSETVLR KCQHCGVNEN NTPAMRRGPA GLRTLCNACG LMWANKGTLR  240
DLSKGGRNVS LDHMEPETPM DVKPTIMEGE FSGIQDEHDI NETTVELTNS LPMQIANHST  300
NGDEQEPLIE LANPSDTDVD IPTNFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.27e-72GATA family protein