PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997252.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ZF-HD
Protein Properties Length: 243aa    MW: 26601.2 Da    PI: 6.2673
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1024.1e-3252107359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++rYkeClkNhA+ +Gg+avDGCgEf+p+ geeg+++alkCaAC+CHRnFHR+e+++
  XP_022997252.1  52 NIRYKECLKNHAIGIGGQAVDGCGEFLPA-GEEGSIDALKCAACNCHRNFHRKETDS 107
                     689*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDFDEEHDDQ DDEVIEEMPI AHHFDATPPP PGEGSSAERK TGGGGGGGGG GNIRYKECLK  60
NHAIGIGGQA VDGCGEFLPA GEEGSIDALK CAACNCHRNF HRKETDSDQG HYYNLHQHHQ  120
FSYRGPPHPS AYVYLTGAPI QQRPLALPAA VSGREEEDNT SNPSSSGGGS GGSGLLKKRF  180
RTKFSQEQKE KMLEFAEKVG WTIQKHDEAD VEEFCRTTGV RRQVLKVWMH NNKHTLGKKC  240
SND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-66ZF-HD family protein