PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997502.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 100aa    MW: 11267.6 Da    PI: 8.7154
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.3e-081257346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      W+    + + +a + + ++   +W + a+ +g g+t++++k ++ +
   XP_022997502.1 12 CWSSKQNKVFENALTVYDKDspdRWQKLASSVG-GKTAEEVKRHYEM 57
                     6********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MTSSSSSSSS SCWSSKQNKV FENALTVYDK DSPDRWQKLA SSVGGKTAEE VKRHYEMLVE  60
DVHNIETGRV PLPNYSKPSK HCSSNTFLDE EQRLKGLKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.17e-33MYB_related family protein