PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022997565.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 249aa    MW: 28408.9 Da    PI: 9.8236
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022997565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.24.5e-21115174357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eq+ +Le l+ +  r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  XP_022997565.1 115 TRWNPTQEQIGILEMLYSRgMRTPNAQQIEHITAQLgnygKIEGKNVFYWFQNHKARERQ 174
                     7*****************99**************************************97 PP
2Wus_type_Homeobox116.21.6e-37115176465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq
     XP_022997565.1 115 TRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQ 176
                        8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MRFFTMGSSM KVHQFARGFW DEPSLSLGCK RLRPLAPKLQ QQQQHHHHQQ QQQHPSSSSD  60
HNTTTTLTTL DLKTFIRPDC GPRKLGSSHD HNKGSSSSSS SSSPQTAVET HPGGTRWNPT  120
QEQIGILEML YSRGMRTPNA QQIEHITAQL GNYGKIEGKN VFYWFQNHKA RERQKQKRNS  180
LGLPHSPRTP PPPILPTFHP SFPGEEDSPY KKKCLYWGFE CLVEHNGILC KKEDGDRTLE  240
LFPLHPEGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.13e-63WOX family protein