PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997706.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 895aa MW: 99404.5 Da PI: 7.7108

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.2	7.1e-19	366	465	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022997706.1 366 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGQ 458 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022997706.1 459 LVMGFRK 465 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MHFMHLLLCM HSLSLSFRHF HAFLLLLCNC HRLPPSLPPR HCMNTSCGAA TPHDWTKGWP 60 LGSAGFAHLC LNCGSAYENL VFCDTYHLEE TGWRDCSFCG KRIHCGCIAS KSMFEYLDYG 120 GIGCTTCVKR SRLDVIRRDE ISNGFDAVTV GNVGLLRPAS VEDRVVQNGI KEEKLLQLCN 180 IMEANETNHF QQAQRVDRSA SPAQNKGENL RSPFGEVGTS FFNMTKLPVK CQPSVGSVAY 240 SQLDTRLKDM QESLSQPSLN IALGVPLGTS NFVVPLSGSA AEEDEKSILP FQPGQRSRPI 300 FPKPLKTGTT VNSETRKGMT PLVRIARPPA EGRGKNQLLP RYWPRITDQE LEQISGDLNS 360 TIVPLFEKVL SASDAGRIGR LVLPKACAEA YFPPISQSEG LPVRIQDVKG NEWTFQFRFW 420 PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPGGQLV MGFRKATNSS DTQDAKISTF 480 PNGSHSGDAS FSGVFQNLPL RAGDISLHKI ENFGGRMTSG QQPMSTMDKK TRNIGSKNKR 540 LLMHSEDALE LRLTWEEAQD LLRPPPSANP TIVTIDDHEF EEYDEPPVFG KRTIFTVRPT 600 GEQKQWAQCD DCSKWRKLPV DVLLPPKWTC SDNIWDLSRR TCSAPEEMNT KEQENLLRAS 660 KDFKKRKIMK SQKSAQELEP SGLDALASAA VLGDSMADVQ ESGTTTRHPR HRQGCTCIVC 720 IQPPSGKGKH KSTCTCNVCL TVKRRFKTLM LRKKKRLSER EMETSLKEGN SQFDESGTSG 780 TLKGTSLQTN HSENERSQIR VKDEEAANSS GQIDLNCHPD REDMQLEVAG LSMMSLVEAA 840 SQPLDSYSKQ IGVSSVTSEQ HSSQPSSAES ERRLSEEGCH GSAHESTSDR CRGHH

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MHFMHLLLCM HSLSLSFRHF HAFLLLLCNC HRLPPSLPPR HCMNTSCGAA TPHDWTKGWP  60
LGSAGFAHLC LNCGSAYENL VFCDTYHLEE TGWRDCSFCG KRIHCGCIAS KSMFEYLDYG  120
GIGCTTCVKR SRLDVIRRDE ISNGFDAVTV GNVGLLRPAS VEDRVVQNGI KEEKLLQLCN  180
IMEANETNHF QQAQRVDRSA SPAQNKGENL RSPFGEVGTS FFNMTKLPVK CQPSVGSVAY  240
SQLDTRLKDM QESLSQPSLN IALGVPLGTS NFVVPLSGSA AEEDEKSILP FQPGQRSRPI  300
FPKPLKTGTT VNSETRKGMT PLVRIARPPA EGRGKNQLLP RYWPRITDQE LEQISGDLNS  360
TIVPLFEKVL SASDAGRIGR LVLPKACAEA YFPPISQSEG LPVRIQDVKG NEWTFQFRFW  420
PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPGGQLV MGFRKATNSS DTQDAKISTF  480
PNGSHSGDAS FSGVFQNLPL RAGDISLHKI ENFGGRMTSG QQPMSTMDKK TRNIGSKNKR  540
LLMHSEDALE LRLTWEEAQD LLRPPPSANP TIVTIDDHEF EEYDEPPVFG KRTIFTVRPT  600
GEQKQWAQCD DCSKWRKLPV DVLLPPKWTC SDNIWDLSRR TCSAPEEMNT KEQENLLRAS  660
KDFKKRKIMK SQKSAQELEP SGLDALASAA VLGDSMADVQ ESGTTTRHPR HRQGCTCIVC  720
IQPPSGKGKH KSTCTCNVCL TVKRRFKTLM LRKKKRLSER EMETSLKEGN SQFDESGTSG  780
TLKGTSLQTN HSENERSQIR VKDEEAANSS GQIDLNCHPD REDMQLEVAG LSMMSLVEAA  840
SQPLDSYSKQ IGVSSVTSEQ HSSQPSSAES ERRLSEEGCH GSAHESTSDR CRGHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	743	754	KRRFKTLMLRKK
2	743	756	KRRFKTLMLRKKKR
3	751	757	LRKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein