PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997708.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 762aa MW: 84451.1 Da PI: 7.6135

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.7e-19	233	332	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022997708.1 233 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGQ 325 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022997708.1 326 LVMGFRK 332 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 762 aa Download sequence
MNIRRDEISN GFDAVTVGNV GLLRPASVED RVVQNGIKEE KLLQLCNIME ANETNHFQQA 60 QRVDRSASPA QNKGENLRSP FGEVGTSFFN MTKLPVKCQP SVGSVAYSQL DTRLKDMQES 120 LSQPSLNIAL GVPLGTSNFV VPLSGSAAEE DEKSILPFQP GQRSRPIFPK PLKTGTTVNS 180 ETRKGMTPLV RIARPPAEGR GKNQLLPRYW PRITDQELEQ ISGDLNSTIV PLFEKVLSAS 240 DAGRIGRLVL PKACAEAYFP PISQSEGLPV RIQDVKGNEW TFQFRFWPNN NSRMYVLEGV 300 TPCIQSMQLQ AGDTVTFSRI DPGGQLVMGF RKATNSSDTQ DAKISTFPNG SHSGDASFSG 360 VFQNLPLRAG DISLHKIENF GGRMTSGQQP MSTMDKKTRN IGSKNKRLLM HSEDALELRL 420 TWEEAQDLLR PPPSANPTIV TIDDHEFEEY DEPPVFGKRT IFTVRPTGEQ KQWAQCDDCS 480 KWRKLPVDVL LPPKWTCSDN IWDLSRRTCS APEEMNTKEQ ENLLRASKDF KKRKIMKSQK 540 SAQELEPSGL DALASAAVLG DSMADVQESG TTTRHPRHRQ GCTCIVCIQP PSGKGKHKST 600 CTCNVCLTVK RRFKTLMLRK KKRLSEREME TSLKEGNSQF DESGTSGTLK GTSLQTNHSE 660 NERSQIRVKD EEAANSSGQI DLNCHPDRED MQLEVAGLSM MSLVEAASQP LDSYSKQIGV 720 SSVTSEQHSS QPSSAESERR LSEEGCHGSA HESTSDRCRG HH

Sequence ? help Back to Top

Protein Sequence Length: 762 aa Download sequence

MNIRRDEISN GFDAVTVGNV GLLRPASVED RVVQNGIKEE KLLQLCNIME ANETNHFQQA  60
QRVDRSASPA QNKGENLRSP FGEVGTSFFN MTKLPVKCQP SVGSVAYSQL DTRLKDMQES  120
LSQPSLNIAL GVPLGTSNFV VPLSGSAAEE DEKSILPFQP GQRSRPIFPK PLKTGTTVNS  180
ETRKGMTPLV RIARPPAEGR GKNQLLPRYW PRITDQELEQ ISGDLNSTIV PLFEKVLSAS  240
DAGRIGRLVL PKACAEAYFP PISQSEGLPV RIQDVKGNEW TFQFRFWPNN NSRMYVLEGV  300
TPCIQSMQLQ AGDTVTFSRI DPGGQLVMGF RKATNSSDTQ DAKISTFPNG SHSGDASFSG  360
VFQNLPLRAG DISLHKIENF GGRMTSGQQP MSTMDKKTRN IGSKNKRLLM HSEDALELRL  420
TWEEAQDLLR PPPSANPTIV TIDDHEFEEY DEPPVFGKRT IFTVRPTGEQ KQWAQCDDCS  480
KWRKLPVDVL LPPKWTCSDN IWDLSRRTCS APEEMNTKEQ ENLLRASKDF KKRKIMKSQK  540
SAQELEPSGL DALASAAVLG DSMADVQESG TTTRHPRHRQ GCTCIVCIQP PSGKGKHKST  600
CTCNVCLTVK RRFKTLMLRK KKRLSEREME TSLKEGNSQF DESGTSGTLK GTSLQTNHSE  660
NERSQIRVKD EEAANSSGQI DLNCHPDRED MQLEVAGLSM MSLVEAASQP LDSYSKQIGV  720
SSVTSEQHSS QPSSAESERR LSEEGCHGSA HESTSDRCRG HH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	610	621	KRRFKTLMLRKK
2	610	623	KRRFKTLMLRKKKR
3	618	624	LRKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein