PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997709.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 714aa MW: 79144 Da PI: 7.7801

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.2e-19	185	284	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022997709.1 185 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGQ 277 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022997709.1 278 LVMGFRK 284 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MEANETNHFQ QAQRVDRSAS PAQNKGENLR SPFGEVGTSF FNMTKLPVKC QPSVGSVAYS 60 QLDTRLKDMQ ESLSQPSLNI ALGVPLGTSN FVVPLSGSAA EEDEKSILPF QPGQRSRPIF 120 PKPLKTGTTV NSETRKGMTP LVRIARPPAE GRGKNQLLPR YWPRITDQEL EQISGDLNST 180 IVPLFEKVLS ASDAGRIGRL VLPKACAEAY FPPISQSEGL PVRIQDVKGN EWTFQFRFWP 240 NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGQLVM GFRKATNSSD TQDAKISTFP 300 NGSHSGDASF SGVFQNLPLR AGDISLHKIE NFGGRMTSGQ QPMSTMDKKT RNIGSKNKRL 360 LMHSEDALEL RLTWEEAQDL LRPPPSANPT IVTIDDHEFE EYDEPPVFGK RTIFTVRPTG 420 EQKQWAQCDD CSKWRKLPVD VLLPPKWTCS DNIWDLSRRT CSAPEEMNTK EQENLLRASK 480 DFKKRKIMKS QKSAQELEPS GLDALASAAV LGDSMADVQE SGTTTRHPRH RQGCTCIVCI 540 QPPSGKGKHK STCTCNVCLT VKRRFKTLML RKKKRLSERE METSLKEGNS QFDESGTSGT 600 LKGTSLQTNH SENERSQIRV KDEEAANSSG QIDLNCHPDR EDMQLEVAGL SMMSLVEAAS 660 QPLDSYSKQI GVSSVTSEQH SSQPSSAESE RRLSEEGCHG SAHESTSDRC RGHH

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MEANETNHFQ QAQRVDRSAS PAQNKGENLR SPFGEVGTSF FNMTKLPVKC QPSVGSVAYS  60
QLDTRLKDMQ ESLSQPSLNI ALGVPLGTSN FVVPLSGSAA EEDEKSILPF QPGQRSRPIF  120
PKPLKTGTTV NSETRKGMTP LVRIARPPAE GRGKNQLLPR YWPRITDQEL EQISGDLNST  180
IVPLFEKVLS ASDAGRIGRL VLPKACAEAY FPPISQSEGL PVRIQDVKGN EWTFQFRFWP  240
NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGQLVM GFRKATNSSD TQDAKISTFP  300
NGSHSGDASF SGVFQNLPLR AGDISLHKIE NFGGRMTSGQ QPMSTMDKKT RNIGSKNKRL  360
LMHSEDALEL RLTWEEAQDL LRPPPSANPT IVTIDDHEFE EYDEPPVFGK RTIFTVRPTG  420
EQKQWAQCDD CSKWRKLPVD VLLPPKWTCS DNIWDLSRRT CSAPEEMNTK EQENLLRASK  480
DFKKRKIMKS QKSAQELEPS GLDALASAAV LGDSMADVQE SGTTTRHPRH RQGCTCIVCI  540
QPPSGKGKHK STCTCNVCLT VKRRFKTLML RKKKRLSERE METSLKEGNS QFDESGTSGT  600
LKGTSLQTNH SENERSQIRV KDEEAANSSG QIDLNCHPDR EDMQLEVAGL SMMSLVEAAS  660
QPLDSYSKQI GVSSVTSEQH SSQPSSAESE RRLSEEGCHG SAHESTSDRC RGHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	562	573	KRRFKTLMLRKK
2	562	575	KRRFKTLMLRKKKR
3	570	576	LRKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein