PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997779.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 162aa MW: 18543 Da PI: 11.1011

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.8e-17	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_022997779.1 12 RGHWRPAEDAKLKELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 57 899***************************.*********996 PP
2	Myb_DNA-binding	51.7	2e-16	64	107	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T eE+ +l +a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_022997779.1 64 RRAFTHEEEARLMQAHRVHGNK-WAMIARLFP-GRTDNGVKNHWHV 107 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MNSGTNAKAC ARGHWRPAED AKLKELVALY GPQNWNLIAE KLDGRSGKSC RLRWFNQLDP 60 RINRRAFTHE EEARLMQAHR VHGNKWAMIA RLFPGRTDNG VKNHWHVIMA RKCRHHFAAG 120 RRRRRTATSD EDSPTNEPPS FMDRSVEPAL FFDFLGVGGG PT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	124	RKCRHHFAAGRRRR
2	121	126	RRRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-68	MYB family protein