PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998175.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 211aa MW: 24463.4 Da PI: 10.6587

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.7	4.1e-11	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + +l +v+++ +++W+ Ia+ ++ gR++k+c++rw++ XP_022998175.1 16 RGHWHAAKNHKLQMLVERHDPHNWNVIAQSLQ-GRSGKSCRLRWFNQ 61 56777777789999****************.*********996 PP
2	Myb_DNA-binding	54.9	2e-17	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eEd++l+ a++ +G++ W+ I+r ++ Rt + +k++w+ XP_022998175.1 68 RDPFTQEEDQRLLAAHTIHGNR-WAIISRLFP-SRTNNAVKNHWHV 111 789*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGSHQIWTSM IVTHSRGHWH AAKNHKLQML VERHDPHNWN VIAQSLQGRS GKSCRLRWFN 60 QLDPRINRDP FTQEEDQRLL AAHTIHGNRW AIISRLFPSR TNNAVKNHWH VIRSRMSRRA 120 SKYHVKTMLG ITNIHSDRNQ GVDFYNFLHL NTRSINGSEV IDHSRKDDEE VNQKAATTAN 180 TGHDVVVQGT HKDEEKVVPF IDFFAAQTSI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-57	MYB family protein