PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998304.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 227aa MW: 25044.4 Da PI: 5.4761

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.6	9.5e-08	152	193	8	54
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR++i +++ L++l+P K++ a++L +A Y+k L XP_022998304.1 152 AARKRREKISEKIRVLQRLVPGG-----SKMDIASMLDEAASYLKFL 193 569****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDDLLWNGSW NNGEDDGCKE SLLFSDGSSR CSSPPLQELQ TVARILGLSE IETPTPDMRA 60 VELAVDPKSW PAGASPGGLL LEELENDKGI GVSPSSSTNY EAESSDRDQI VSRMKELIYH 120 AAVFRPVNLG IETVEKKKRR NVTMSKEPQT VAARKRREKI SEKIRVLQRL VPGGSKMDIA 180 SMLDEAASYL KFLRAQIKAL EGNGYKLGSN CTSFNPTIFP SNAYFPF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	140	KKKRR
2	136	157	KKKRRNVTMSKEPQTVAARKRR
3	136	159	KKKRRNVTMSKEPQTVAARKRREK
4	137	158	KKKRRNVTMSKEPQTVAARKRR
5	137	160	KKKRRNVTMSKEPQTVAARKRREK
6	138	159	KKKRRNVTMSKEPQTVAARKRR
7	154	159	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	6e-37	bHLH family protein