PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998638.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 269aa MW: 29945.7 Da PI: 9.1102

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.8	4.6e-39	99	215	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasns 85 gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++k+aikel +t s as++ +++++ XP_022998638.1 99 GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTkygnfevvggarRMSLASDV---EEEEE---- 186 8**************************************************************66666555443322222222...11111.... PP TCP 86 ssg...........kaaksaakskksqksaa 105 k+++++ak+kk+ ++++ XP_022998638.1 187 --MtnkvevfnllaKQSRAKAKEKKQVDDEN 215 ..11112233444444444445555555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGSSSYNLNP FPYFPSPSTA SYNLPLSIPS LLNSEPTATT FNFHQPHQDP VSFLAPYLPI 60 GHFSTSTTPE AVINFAVAGS NVQAFGNIPS ASGARMGSGK KDRHSKIYTA QGLRDRRVRL 120 SIDIARKFFD LQDMLGYDKA SKTLEWLFSK SKKAIKELSR TKYGNFEVVG GARRMSLASD 180 VEEEEEMTNK VEVFNLLAKQ SRAKAKEKKQ VDDENGDDDD GKIDVHGGET SNLSMEESSF 240 MNKRKLYAKK FIEDDEMKLP QKGISKNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	5e-31	TCP family protein