PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998726.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 218aa    MW: 24912.3 Da    PI: 8.938
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998726.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.3e-1762106147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E+ l +d++ ++G++ W++Iar+++ gRt++++k++w+++
   XP_022998726.1  62 RGKMSPQEERLVLDLHSKWGNR-WSKIARKLP-GRTDNEIKNFWRTH 106
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDRAGGLPIG LLCWFVRRSP VGFHRQSIRF EGGGRVQIIG LKRNGKSCRL RWVNYLHPGL  60
KRGKMSPQEE RLVLDLHSKW GNRWSKIARK LPGRTDNEIK NFWRTHVRKL AQEKKKAAVH  120
HVVVSPSSSS TVDSVPTIDI GEESFYDTGG DWSCYMGEED EKGYSYSMDD IWRDIDDQSV  180
VKAVCDEKLS CGPVASPAPW EYGEYSPPWK VAEENFRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.43e-63MYB_related family protein