PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998774.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 344aa MW: 38041.2 Da PI: 7.732

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.3	3.6e-25	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e XP_022998774.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 119 79***************************************997 PP
2	QLQ	62.2	1.4e-21	10	45	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l++Ky+++++P+Pp+L++ ++ XP_022998774.1 10 SPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVK 45 89******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MNSGPKPCIS PFTPTQWQEL EHQALIFKYM VSGVPIPPDL IFSVKRSLDS SISARLFPHQ 60 PIGWGCFEMG FGRKADPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI 120 SSTPPAQTPP PLILTSTRSL SASSPTSSSY SLATLSSSSS LTCETQSYQQ APAPAPAAAY 180 QESSIHPYLY PQSSSSRPPC SDFSPTSTNP QLFLYSGTHP QADKDYRDIN GPREGAGVQA 240 FFPSVADSAR SIGEVYSQPI GMDSYKGFSH AVSNSYQIYS AKQARQQQEQ HCFVLGTDFN 300 KSSRSAKTEE EDDAETQKPL LHFFEDCPPK NSDSWLDLAT NSNG

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MNSGPKPCIS PFTPTQWQEL EHQALIFKYM VSGVPIPPDL IFSVKRSLDS SISARLFPHQ  60
PIGWGCFEMG FGRKADPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI  120
SSTPPAQTPP PLILTSTRSL SASSPTSSSY SLATLSSSSS LTCETQSYQQ APAPAPAAAY  180
QESSIHPYLY PQSSSSRPPC SDFSPTSTNP QLFLYSGTHP QADKDYRDIN GPREGAGVQA  240
FFPSVADSAR SIGEVYSQPI GMDSYKGFSH AVSNSYQIYS AKQARQQQEQ HCFVLGTDFN  300
KSSRSAKTEE EDDAETQKPL LHFFEDCPPK NSDSWLDLAT NSNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-66	GRF family protein