PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998873.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 517aa MW: 57798.9 Da PI: 7.4185

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.2e-08	395	443	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022998873.1 395 SWTLSEVMKLVEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 443 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVVC 120 SGINKLSGTV NRQITDDIFN LAPGSCNASF LGNVDFGYPQ GFCTTDLGVD LSFAGGHNVA 180 FDQKDGKLMI SSSTGSSGCS GSSTACLNDE NMSDDRPVKR KRLSSCDSSK LNSEHNESKI 240 VPFNEGNKVE TPVTEKRLRK PPRRYSEESI EQKSRSNFKK SALKASKDKS LPSVCHTHQW 300 QKKLKAAPIV PKDKSFNGGC IQVPFGLPIE EGHSTKKRIC WEPEEIKDNR ILCIKDKNDV 360 ESFSAESEDE NTEDECVTKG NTTQKGNSRR KHHISWTLSE VMKLVEGVSE YGVGRWTEIK 420 RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVLGR KQALQQVPES VLCRVRELAA 480 IYPYPRENKS KETCSAPTTS SFKSTTSNML VCLPTVM

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL  60
DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVVC  120
SGINKLSGTV NRQITDDIFN LAPGSCNASF LGNVDFGYPQ GFCTTDLGVD LSFAGGHNVA  180
FDQKDGKLMI SSSTGSSGCS GSSTACLNDE NMSDDRPVKR KRLSSCDSSK LNSEHNESKI  240
VPFNEGNKVE TPVTEKRLRK PPRRYSEESI EQKSRSNFKK SALKASKDKS LPSVCHTHQW  300
QKKLKAAPIV PKDKSFNGGC IQVPFGLPIE EGHSTKKRIC WEPEEIKDNR ILCIKDKNDV  360
ESFSAESEDE NTEDECVTKG NTTQKGNSRR KHHISWTLSE VMKLVEGVSE YGVGRWTEIK  420
RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVLGR KQALQQVPES VLCRVRELAA  480
IYPYPRENKS KETCSAPTTS SFKSTTSNML VCLPTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	3e-29	MYB_related family protein