PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998902.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 195aa    MW: 21195.3 Da    PI: 6.6341
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260137.54.9e-43361351100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da+sslvyeA ar+rdPvyG++g i +lq+q+++l+ae+a
  XP_022998902.1  36 PCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICHLQKQINELQAEVA 130
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022998902.1 131 KTHAE 135
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MECSDAKSGP TSTILRSQSP PPTPPPCVQA GVVVTPCAAC KILRRRCAEK CVLAPYFPPS  60
DPLKFTIAHR VFGASNIIKL LQDLPESQRA DAVSSLVYEA SARIRDPVYG CAGAICHLQK  120
QINELQAEVA KTHAELVNMQ CHQANLVALI CKELTQTPAP TPPPDHCSLD NNFSTATPQS  180
YPLFDDSNIW EALWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-69LBD family protein