PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999214.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 358aa    MW: 39862.9 Da    PI: 8.2901
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.86.4e-32219275158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF
  XP_022999214.1 219 DGPIYVNAKQYHGILRRRQSRAKLESQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 275
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MPEPGLLLFG LKPQFLSYCG LLELLMNMMA IPLKNFSQKN LDQDSVHSVF PFSVDCTPWR  60
NSNERKIPLP LSDNTTLKLE TPPQHHHKHL GFQLPDQESS TAHSIGQSLH KVCTMEVQNA  120
QEQCISSESG QEENCGESVE NQMKPVILFS NPEFMFSTPQ VDGSQPMTRV SYPYIDPYYG  180
GLLCSAYTQQ AINNQAQVNT NVVGMAPARV PIPHALAEDG PIYVNAKQYH GILRRRQSRA  240
KLESQNRVIR NRKPYLHESR HLHALNRVRG SGGRFLSSKK NQSPVQSTPS TTLSQQMNTP  300
DFNTCSSETS DRGMSSEITS ISNGSVRFGR SDSQLSALSS RMGGSMEQYS GDLMRGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-48NF-YA family protein