PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999222.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 371aa MW: 42228 Da PI: 8.9013

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022999222.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119 79***************************************987 PP
2	QLQ	56.2	1e-19	8	38	2	32
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 +FTaaQ+q+L++Q+l++Ky++++ PvPp+Ll XP_022999222.1 8 PFTAAQWQELEHQALIFKYMVSGIPVPPDLL 38 8****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MSARNRLPFT AAQWQELEHQ ALIFKYMVSG IPVPPDLLYT MKRSSLDTPF ISRLFPHQYP 60 DVGWNFVQMG SGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV 120 LKPTTTITAL TSNPSTPPIS SITHNSTASL STNSFPSEIH THSCFNTPSP HPFLYQHGSF 180 SRPPGSAHLQ HSSNPSLLLD PPADYRRNRY VYGGKEDVDK HPFLSEEHSG NMRGFSASSM 240 EDPWQLTPLT MSCSSSSPRH KNCSALQGDY SSYLQLQSFG GSPKQVKQDE HYYAVGKYNE 300 MQSKMEREKP EKTMHHFFGE WSPKDRESWV DLDDKSSNTG SVSETRLSMS ILNSSQHDFS 360 SIFSSNKHNE N

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MSARNRLPFT AAQWQELEHQ ALIFKYMVSG IPVPPDLLYT MKRSSLDTPF ISRLFPHQYP  60
DVGWNFVQMG SGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV  120
LKPTTTITAL TSNPSTPPIS SITHNSTASL STNSFPSEIH THSCFNTPSP HPFLYQHGSF  180
SRPPGSAHLQ HSSNPSLLLD PPADYRRNRY VYGGKEDVDK HPFLSEEHSG NMRGFSASSM  240
EDPWQLTPLT MSCSSSSPRH KNCSALQGDY SSYLQLQSFG GSPKQVKQDE HYYAVGKYNE  300
MQSKMEREKP EKTMHHFFGE WSPKDRESWV DLDDKSSNTG SVSETRLSMS ILNSSQHDFS  360
SIFSSNKHNE N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-55	GRF family protein