PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999504.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 373aa MW: 41743.1 Da PI: 6.5133

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.1	4.3e-36	78	169	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk+ye++ed+e++ ++swse gnsf+v+d+++++ ++LpkyFkhsnf+SF+RQLn+YgF+k+++++ weF+++ F+ gkk+ll++ XP_022999504.1 78 FLKKTYEMVEDPETDPVVSWSEGGNSFIVWDSHKLSITLLPKYFKHSNFSSFIRQLNTYGFRKIDSDK---------WEFANEGFQGGKKHLLKN 163 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_022999504.1 164 IKRRSR 169 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MINQTILSDG GGGCPDGAAT ASGDIMDQRT VKEEEIEVSA GTMEGGGGES DSGGDGVSAS 60 SATAKPMEGL HEVGPAPFLK KTYEMVEDPE TDPVVSWSEG GNSFIVWDSH KLSITLLPKY 120 FKHSNFSSFI RQLNTYGFRK IDSDKWEFAN EGFQGGKKHL LKNIKRRSRY NNYKQQQHHL 180 GMPMGLQDLT KHPLVEAELH ALKSDNQVLR VEMLKLREQQ HDSQNQLTMV EDRVRCVESK 240 HQQMLSFVSK MSRNPGFCRQ LVQRRMLRKK LMNNGDEFGN NRRLLAMQGH QNLSHSELVS 300 TEMFPHVIEP GPAVLEQPVR ASTMVVDEDS DSKFFLELED LIKKPPPPPT TTQDCPSGYV 360 QQQAFHGFVG SIP

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MINQTILSDG GGGCPDGAAT ASGDIMDQRT VKEEEIEVSA GTMEGGGGES DSGGDGVSAS  60
SATAKPMEGL HEVGPAPFLK KTYEMVEDPE TDPVVSWSEG GNSFIVWDSH KLSITLLPKY  120
FKHSNFSSFI RQLNTYGFRK IDSDKWEFAN EGFQGGKKHL LKNIKRRSRY NNYKQQQHHL  180
GMPMGLQDLT KHPLVEAELH ALKSDNQVLR VEMLKLREQQ HDSQNQLTMV EDRVRCVESK  240
HQQMLSFVSK MSRNPGFCRQ LVQRRMLRKK LMNNGDEFGN NRRLLAMQGH QNLSHSELVS  300
TEMFPHVIEP GPAVLEQPVR ASTMVVDEDS DSKFFLELED LIKKPPPPPT TTQDCPSGYV  360
QQQAFHGFVG SIP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	167	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-78	HSF family protein