PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999523.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 208aa    MW: 22634.1 Da    PI: 7.6598
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601314.9e-41571561100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe +r+da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la
  XP_022999523.1  57 PCAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEAHARLRDPVYGSAGAICQLQKQVSELQAQLA 151
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022999523.1 152 KARAE 156
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAYLAKCTNA PSTPITVSNH PLSYSPISSS SAATTNFGSP PTSQPSSPPP PAVILSPCAA  60
CKILRRRCVE KCVLAPYFPP SEPLKFTIAH RVFGASNIIK FLQELPECQR TDAVSSMVYE  120
AHARLRDPVY GSAGAICQLQ KQVSELQAQL AKARAEVANM QHQQANLLAL ICMEMRQSPD  180
PVWPPQLPDT TCFLDDAALS SPWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-68LBD family protein