PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999639.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 690aa MW: 74187.1 Da PI: 6.3902

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.8	3.1e-16	450	496	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_022999639.1 450 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 496 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MPLSELCRVA REKLDSAQDR NNMVASDLSL SPENDVFELV WENGQILQQG QSSRTRKNSN 60 MNTSQALCLP GHFNNAKMGK FGAIDSVVRD VIATGSSPEV ELARDDDDDD DNDIVPWLSY 120 PLDGHLQHDY SSDFLPELSG VTINDHPTRH NVASSIGKAS GVHQVNRDTR LNSLHGTNLE 180 DGNISKLSTL DVSTTGPRSS TNELRSLASQ QSQTLFPHLR VKCTGSTENA SGKILHDSLI 240 GQTPQVPLIA SSSSSTARQK LDPTPSSNSP NVINFSHFLR PAALLKSNPQ NHGVVGTVGS 300 AANSQRGQSS CIRNESKTCC KNAIVPSIDD NKPSDAKAPE QLQAVKHPKL ACLGDSANNE 360 DRPDRCLEVG APKVLPDSEK AVESVFAASV CSRNSVEGAS DDPTLDRKRK CHETEDSEWH 420 SDDVEEECND VKRVTPTRGT GSKRSRAAEV HNLSERRRRD RINEKMRALQ ELIPNCNKVD 480 KASMLDEAIE YLKTLQLQVQ VMLCSLRQKH IMSMGAGLFM PPMMSPGGMP FMNAPHMYSP 540 TGVGMGMGFG IGMPDVNVGP PGYPMVQVPH LQGTPFPGPS ISAQTVMHGM PGSNFQVLGF 600 PGQGLPIPMP RGPIAPFTGG PFMTNPGVAV SPVENFGSAA ACSSKDASPK SDSPMVPNGG 660 TDPLTTPTPR QANEQASCAN GQPCEPHHQK

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MPLSELCRVA REKLDSAQDR NNMVASDLSL SPENDVFELV WENGQILQQG QSSRTRKNSN  60
MNTSQALCLP GHFNNAKMGK FGAIDSVVRD VIATGSSPEV ELARDDDDDD DNDIVPWLSY  120
PLDGHLQHDY SSDFLPELSG VTINDHPTRH NVASSIGKAS GVHQVNRDTR LNSLHGTNLE  180
DGNISKLSTL DVSTTGPRSS TNELRSLASQ QSQTLFPHLR VKCTGSTENA SGKILHDSLI  240
GQTPQVPLIA SSSSSTARQK LDPTPSSNSP NVINFSHFLR PAALLKSNPQ NHGVVGTVGS  300
AANSQRGQSS CIRNESKTCC KNAIVPSIDD NKPSDAKAPE QLQAVKHPKL ACLGDSANNE  360
DRPDRCLEVG APKVLPDSEK AVESVFAASV CSRNSVEGAS DDPTLDRKRK CHETEDSEWH  420
SDDVEEECND VKRVTPTRGT GSKRSRAAEV HNLSERRRRD RINEKMRALQ ELIPNCNKVD  480
KASMLDEAIE YLKTLQLQVQ VMLCSLRQKH IMSMGAGLFM PPMMSPGGMP FMNAPHMYSP  540
TGVGMGMGFG IGMPDVNVGP PGYPMVQVPH LQGTPFPGPS ISAQTVMHGM PGSNFQVLGF  600
PGQGLPIPMP RGPIAPFTGG PFMTNPGVAV SPVENFGSAA ACSSKDASPK SDSPMVPNGG  660
TDPLTTPTPR QANEQASCAN GQPCEPHHQK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	455	460	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-58	bHLH family protein