PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999761.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 225aa MW: 25842.8 Da PI: 4.2236

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60	3.7e-19	43	96	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa+ k XP_022999761.1 43 KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCK 96 566899**********************************************99 PP
2	HD-ZIP_I/II	127.3	6.8e-41	43	134	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrls +qv++LE+sFe e+kLeperK++la+eLglqprqva+WFqnrRAR ktkqlEkdy +Lk++yd+lk++ e L +e+eeL++e+++ XP_022999761.1 43 KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRN 134 9**************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MADGAVYAPP SSDVLDSLII PGEFIGETNE DELLDGLWRK ASKKRRLSVD QVQFLEKSFE 60 VENKLEPERK TQLAKELGLQ PRQVAIWFQN RRARCKTKQL EKDYLSLKTS YDNLKSSYED 120 LVREKEELET EIRNLEERLA NGEKGNRIDC CWENQNSSMA DSSHGFETEL SDCFSQVEEE 180 NLSGDLLPIC FPKLESCYYD DDLTDGCCNL VGFQIEDQAL GFWPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	99	RRARCKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	9e-36	HD-ZIP family protein