PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999829.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 383aa MW: 44277 Da PI: 7.5243

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.2	1.8e-23	193	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +p+l Wt++LH+ F++a+e L G +kA Pk+il++m+v+gL e+v SHLQk+R XP_022999829.1 193 RPKLIWTQQLHKTFLQAIEAL-GVDKAHPKEILQHMNVPGLRKENVSSHLQKFRF 246 589****************.******************************6 PP
2	Myb_DNA-binding	32.5	2e-10	196	245	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + WT+++++ +++a++ lG + ++k I ++m+ g+ +++ s++qk++ XP_022999829.1 196 LIWTQQLHKTFLQAIEALGVDkaHPKEILQHMNvPGLRKENVSSHLQKFR 245 56**********************************************97 PP
3	Response_reg	55.4	3.5e-19	15	124	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+ +t+ ++e l +l G XP_022999829.1 15 VLVVDHDSTTLKIVSKMLGVCGY-EAVMAKCAIDALRIVKERKndIHLILTDTHLPDMGRYELLEKIMEQTSTLPIVTMTTDDNEIVKLGCLFKG 108 89*******************.9999*******887777******************99999******************* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+ +l+Kp ++++++ XP_022999829.1 109 AMLCLVKPLTMKNIRD 124 *******9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV MAKCAIDALR IVKERKNDIH 60 LILTDTHLPD MGRYELLEKI MEQTSTLPIV TMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIRDLWQFLF IGGRERSISI RTSNQVQKEL TDENDVDKST DEKFQKTKRK EHNEDVSTRQ 180 VEGDGSDSTR PKRPKLIWTQ QLHKTFLQAI EALGVDKAHP KEILQHMNVP GLRKENVSSH 240 LQKFRFSLKQ DQDVKKKPFK SFETAQIPNH RTKLPINVDI FMAKPQETQP QPYNNLSPTS 300 INSNLMGICD VVSLESCFSK VITSQTCSMN STRRRSLEDQ DRRQWFECNR KEMTSTMVEE 360 QGHCMFKVDE ELDGVLDVHD LLF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV MAKCAIDALR IVKERKNDIH  60
LILTDTHLPD MGRYELLEKI MEQTSTLPIV TMTTDDNEIV KLGCLFKGAM LCLVKPLTMK  120
NIRDLWQFLF IGGRERSISI RTSNQVQKEL TDENDVDKST DEKFQKTKRK EHNEDVSTRQ  180
VEGDGSDSTR PKRPKLIWTQ QLHKTFLQAI EALGVDKAHP KEILQHMNVP GLRKENVSSH  240
LQKFRFSLKQ DQDVKKKPFK SFETAQIPNH RTKLPINVDI FMAKPQETQP QPYNNLSPTS  300
INSNLMGICD VVSLESCFSK VITSQTCSMN STRRRSLEDQ DRRQWFECNR KEMTSTMVEE  360
QGHCMFKVDE ELDGVLDVHD LLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	7e-45	ARR-B family protein