PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999842.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 224aa MW: 25607.3 Da PI: 6.3816

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.6	9.1e-30	11	58	3	50
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ien + rqvtfskRrng++KKA+ELSvLCdaeva+iifs++gklye++ XP_022999842.1 11 IENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA 58 9**********************************************8 PP
2	K-box	78.6	1.6e-26	83	175	8	99
K-box 8 sleeakaeslqqel.akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s+++ + e+l++e+ a L k+ie+L+ ++R++lGedL+s+s+ eLq++e+qLeks+ kiR++K e++ eqi++l++ke+ l+ en +L +k+e XP_022999842.1 83 SVSDIQLEHLNHEAaATLMKKIEQLEVSKRKMLGEDLGSCSIDELQEVEHQLEKSVCKIRARKVEVFEEQIKQLKHKENLLEAENAKLLEKWE 175 57788888988886268************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MVRGKTQMRL IENATSRQVT FSKRRNGLMK KAFELSVLCD AEVALIIFSP RGKLYEFANS 60 SMQATLERYR KHAKTKEALE PPSVSDIQLE HLNHEAAATL MKKIEQLEVS KRKMLGEDLG 120 SCSIDELQEV EHQLEKSVCK IRARKVEVFE EQIKQLKHKE NLLEAENAKL LEKWESEAEG 180 GVKEVERGEN LMNYTESSSP SSEVETELFI GPPETRPRTF LSLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	6e-75	MIKC_MADS family protein