PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999964.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 275aa    MW: 31043.9 Da    PI: 6.9162
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.21.7e-16230263132
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ 
  XP_022999964.1 230 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWAN 263
                     *****99999**********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDGIHASDGR MHMSHAQHSM HTQSVQEQEH HDLHYMSNGN GMADEHENEG HGIMVVEREA  60
PSDHGDLAEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDSVL PEKVQAVLLL LGGREVPLRV  120
PSIPITNQPN DRHLTDEAFN QALAIPPRLS VPQRLASLIR FREKRKERNF DKKIRYTVRK  180
EVALRMQRNK GQFTSSKPIH EDSLSATTSW ESNETWCSDG NGSHQQEILC RHCGISEKST  240
PMMRRGPDGP RTLCNACGLM WANKVYFFCI GQSSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-112GATA family protein